Articles

Association between the pregnancy exposome and fetal growth
L Agier, X Basagaña, C Hernandez-Ferrer, L Maitre, I Tamayo Uria, ..., M Vrijheid, R Slama
International Journal of Epidemiology  (2020-03-13) published
 
Assessment of coverage for endogenous metabolites and exogenous chemical compounds using an untargeted metabolomics platform
SW Kong, C Hernandez-Ferrer
Pacific Symposium on Biocomputing  (2020-01-01) published
 
The Clinical Genome and Ancestry Report (CGAR): An Interactive Web Application for Prioritizing Clinically-implicated Variants from Genome Sequencing Data with Ancestry Composition
IH Lee, JA Negron, C Hernandez‐Ferrer, W Jefferson Alvarez, KD Mandl, SW Kong
Human Mutation  (2019-11-06) published
 
Dose and time effects of solar simulated ultraviolet radiation on the in vivo human skin transcriptome
M Bustamante*, C Hernandez‐Ferrer*, A Tewari, Y Sarria, GI Harrison, E Puigdecanet, L Nonell, W Kang, MR Friedländer, X Estivill, JR González, M Nieuwenhuijsen, AR Young
The British Journal of Dermatology  (2019-09-16) published
 
Early-Life Environmental Exposures and Blood Pressure in Children
C Warembourg, L Maitre, ..., C Hernandez-Ferrer, ..., M Vrijheid, X Basagaña
Journal of the American College of Cardiology  (2019-09-10) published
 
Comprehensive study of the exposome and omic data using rexposome Bioconductor packages
C Hernandez-Ferrer, G A Wellenius, I Tamayo, X Basagaña, J Sunyer, M Vrijheid, JR Gonzalez
Bioinformatics  (2019-06-27) published
 
Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis
O Gruzieva, C Xu, ..., C Hernandez-Ferrer, ..., AA Baccarelli, E Melén
Environmental Health Perspectives  (2019-05-31) published
 
Comparative analysis of whole-genome sequencing pipelines to minimize false negative findings
K Hwang, IH Lee, H Li, DG Won, C Hernandez-Ferrer, JA Negron, SW Kong
Scientific reports  (2019-03-01) published
 
Human Early Life Exposome (HELIX) study: a European population-based exposome cohort
L Maitre, J de Bont, ..., C Hernandez-Ferrer, ..., J Wright, M Vrijheid
BMJ open  (2018-09-10) published
 
A systemic approach to identify signaling pathways activated during short-term exposure to traffic-related urban air pollution from human blood
JE Vargas, N Kubesch, C Hernandez-Ferrer, G Carrasco-Turigas, M Bustamante, M Nieuwenhuijsen, JR Gonzalez
Environmental science and pollution research international  (2018-08-23) published
 
WEScover: selection of whole exome sequencing vs. gene panel testing
WJ Alvarez, ..., C Hernandez-Ferrer, …, SW Kong
bioRxiv  (2018-07-27) published
 
CTDquerier: a bioconductor R package for Comparative Toxicogenomics Database (TM) data extraction, visualization and enrichment of environmental and toxicological studies
C Hernandez-Ferrer, JR Gonzalez
Bioinformatics  (2018-04-24) published
 
Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk
M Rubio, M Bustamante, C Hernandez-Ferrer, D Fernandez-Orth, L Pantano, Y Sarria, M Piqué-Borras, K Vellve, S Agramunt, R Carreras, X Estivill, JR Gonzalez, A Mayor
PloS ONE  (2018-03-05) published
 
psygenet2r: a R/Bioconductor package for the analysis of psychiatric disease genes
A Gutiérrez-Sacristán*, C Hernandez-Ferrer*, JR Gonzalez, LI Furlong
Bioinformatics  (2017-12-15) published
 
The acute effects of ultraviolet radiation on the blood transcriptome are independent of plasma 25OHD3
M Bustamante*, C Hernandez-Ferrer*, Y Sarria, GI Harrison, L Nonell, W Kang, MR Friedländer, X Estivill, JR González, M Nieuwenhuij, AR Younge
Environmental Research  (2017-11-01) published
 
MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration
C Hernandez-Ferrer, C Ruiz-Arenas, A Beltran-Gomila, JR González
BMC Bioinformatics  (2017-01-17) published
 
The Pregnancy Exposome: Multiple Environmental Exposures in the INMA-Sabadell Birth Cohort
O Robinson, X Basagaña, L Agier, M de Castro, C Hernandez-Ferrer, JR Gonzalez, J. Grimalt, M Nieuwenhuijsen, J Sunyer, R Slama, M Vrijheid
Environmental Science & Technology  (2015-07-13) published
 
affy2sv: an R package to pre-process Affymetrix CytoScan HD and 750K arrays for SNP, CNV, inversion and mosaicism calling
C Hernandez-Ferrer, I Quintela Garcia, K Danielski, A Carracedo, LA Pérez-Jurado, JR Gonzalez
BMC Bioinformatics  (2015-05-20) published
 

Talks

Exposome-Wide Association Study in Autism Spectrum Disorder Using Targeted and Untargeted Metabolomics Platforms
C Hernandez-Ferrer, DI Walker, CC Johnson, MK Chung, IH Lee, WJ Alvarez, CJ Patel, KD Pennell, DP Jones, SW Kong
2019 International Society for Autism Research Annual Meeting (INSAR 2019)  program
2019-05-01 to 2019-05-04 (performed: 2019-05-02)
 
Extending Bioconductor To Exposome Data Analysis
C Hernandez-Ferrer, JR Gonzalez
BioC 2017: Where Software and Biology Connect  program
2017-07-27 to 2017-07-28 (performed: 2017-07-27)
 
rexposome: a Bioconductor package for characterizing multiple environmental factors and its association with different omics biomarkers and diseases
C Hernandez-Ferrer, M Vrijheid, JR Gonzalez
Bioconductor European Developers’ Workshop  program
2016-12-06 to 2016-12-07 (performed: 2016-12-06)
 
rexposome: a bioinformatic tool for characterizing multiple environmental factors and its association with different omics biomarkers and diseases
C Hernandez-Ferrer, M Vrijheid, JR Gonzalez
The Emory Exposome Summer Course  program
2016-06-12 to 2016-06-17 (performed: 2016-06-12)
 

Posters

MEAL: Methylation and Expression AnaLyzer
C Ruiz Arenas, C Hernandez-Ferrer, JR Gonzalez (conductor: C Ruiz Arenas)
XIII Symposium on Bioinformatics  program
 
rexposome: A bioinformatic tool for characterizing multiple environmental factors and its association with different omics biomarkers and disease
C Hernandez-Ferrer, M Vrijheid, JR Gonzalez (conductor: C Hernandez-Ferrer)
XIII Symposium on Bioinformatics  program  poster
 
Analyzing SNPs, CNVs, inversions and mosaicisms association studies using Affymetrix CytoScan
C Hernandez-Ferrer, I Quintela Garcia, K Danielski, A Carracedo Alvarez, LA Perez-Jurado, JR Gonzalez (conductor: C Hernandez-Ferrer)
Molecular Targets for Predictive and Personalized Medicine of Cancer  program  poster
 
The correlation structure of the Pregnancy Exposome: multiple environmental exposures in the INMA-Sabadell Birth Cohort
O Robinson, M Casas, X Basagaña, C Hernandez-Ferrer, M Vrijheid (conductor: M Casas)
Prenatal Programming and Toxicity Summit (PPTOX IV)
 
Analyzing SNPs, CNVs, inversions and mosaicisms association studies using Affymetrix CytoScan
C Hernandez-Ferrer, I Quintela Garcia, K Danielski, A Carracedo Alvarez, LA Perez-Jurado, JR Gonzalez (conductor: C Hernandez-Ferrer)
XII Symposium on Bioinformatics  program  poster
 
Detection of cancer signatures by integrating different features from omics data combining multi-block and path modelling methods
JR Gonzalez, M Esnaola, A Caceres, C Hernandez-Ferrer, M Lopez-Sanchez, LA Perez-Jurado (conductor: JR Gonzalez)
Integrative and Computational Biology Joint Symposium  program